PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr042464.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family GRAS
Protein Properties Length: 245aa    MW: 27149.2 Da    PI: 10.7345
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr042464.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS291.3e-09102161192257
         GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerf 257
                  + ++++ gEa+aVn+ +   ++ +++++l++    vL++vk+lsPk+vv  ++ + +++ +F +r 
  Pbr042464.1 102 DVIQTNDGEAVAVNFPI--WSTSNQPAALPN----VLRFVKQLSPKIVVSLDRGCGRSDLPFPQRT 161
                  4578889********99..666678999999....***************************9996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF561762.86E-6131IPR016166FAD-binding, type 2
PfamPF035144.6E-7102161IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0016614Molecular Functionoxidoreductase activity, acting on CH-OH group of donors
GO:0050660Molecular Functionflavin adenine dinucleotide binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MGEDLFWAIR GGGGGSFGVI LWWKIKLVPV PETVTVFTVP KTLETGATKV LHKWQQVAAT  60
KLDEDLFMRV VIQVSEGSKT GNRTVTTLYQ AQFLGGADRL LDVIQTNDGE AVAVNFPIWS  120
TSNQPAALPN VLRFVKQLSP KIVVSLDRGC GRSDLPFPQR TLQPFLPRIL LQQSPTSDRS  180
PNGGRSRAMS PAVVSGCLAE RTHGTYPSRT HVPCRTLSLR HGKDIQRTWT PHKRHFWCEQ  240
RQTP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4ud8_A3e-301194225425FAD-BINDING AND BBE DOMAIN-CONTAINING PROTEIN
4ud8_B3e-301194225425FAD-BINDING AND BBE DOMAIN-CONTAINING PROTEIN
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009347389.10.0PREDICTED: uncharacterized protein LOC103939060
TrEMBLM5WPC04e-56M5WPC0_PRUPE; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45160.12e-12GRAS family protein